The ENIGMA-PD-WML Pipeline: A Containerized, User-Friendly Approach for Accurate, Standardized Segmentation of White Matter Lesions in Multi-Site MRI Data
Sarah Al–Bachari, Shauna Angell, Aswin Abraham…·Hamied A. Haroon
Author
University of Southern CaliforniaORCID 0000-0002-2269-8644Unclaimed ORCID profile · follow to get notified of new preprints
17 papers
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Sarah Al–Bachari, Shauna Angell, Aswin Abraham…·Hamied A. Haroon
Kay Jann, Gilsoon Park, John Matthew Ringman, Hosung Kim
This study compares fMRI complexity and tau-PET in classifying cognitive impairment, finding fMRI matches tau-PET performance with better F1-score and AUC.
Xingfeng Shao, Qinyang Shou, Kimberly Felix…·Danny J.J. Wang
The paper investigates age and sex differences in BBB function using MRI in 186 participants, finding more pronounced decline in males starting in the early 60s, particularly in parietal and temporal regions.
Mengting Liu, Alyssa H. Zhu, Piyush Maiti…·Alzheimer’s Disease Neuroimaging Initiative
This paper uses a GAN-based style transfer approach to harmonize multi-site MRI images without site labels, effectively removing cross-site variation while preserving clinical patterns.
JaeYeon Kim, Kadellyn Sandoval, Aunoy Poddar…·Mercedes F. Paredes
The paper identifies an expanded subventricular zone in neonatal gyrencephalic brains that supports ongoing neuronal migration to the cortex.
Artemis Zavaliangos‐Petropulu, Bethany P. Tavenner, Miranda Rennie Donnelly…·Sook‐Lei Liew
This study finds that smaller ipsilesional hippocampal volume is associated with worse upper limb sensorimotor impairment in chronic stroke patients, with a stronger effect in women.
Sook‐Lei Liew, Nicolas Schweighofer, James Howard Cole…·Paul M. Thompson
This study shows that global brain health, measured by brain age, influences post-stroke sensorimotor outcomes and mediates the effect of lesion damage.
Soonhyun Yook, Hea Ree Park, Claire J. Park…·Hosung Kim
The paper introduces an EEG-based brain age index to assess brain health and sleep disorders, finding higher indices correlate with cortical thinning and specific sleep disorder patterns.
Xinting Ge, Yuanjie Zheng, Yuchuan Qiao…·Mengting Liu
This study compares hippocampal development in preterm and term-born neonates using MRI, finding asymmetrical structural impairments in preterm infants.
Sook‐Lei Liew, Artemis Zavaliangos‐Petropulu, Nicolas Schweighofer…·Matthew A. Edwardson
This study finds that smaller spared subcortical nuclei are linked to worse sensorimotor outcomes after stroke, varying by time since stroke and type of impairment.
Yue Cheng, Wen Shen, Junhai Xu…·Hosung Kim
This study identifies functional connectivity neuromarkers that reveal distinct cognitive recovery patterns in patients with overt hepatic encephalopathy after liver transplantation.
Mengting Liu, Sharon Y. Kim, Ben A. Duffy…·Hosung Kim
This paper uses a graph convolutional neural network to predict brain age in preterm neonates, showing it outperforms other methods and links brain age to future neurodevelopmental outcomes.
Mengting Liu, Claude Lepage, Sharon Y. Kim…·Hosung Kim
This paper introduces a robust T1 MRI cortical surface pipeline for neonatal brains and evaluates it across multiple datasets, showing high accuracy and reproducibility.
Shiyu Yuan, Mengting Liu, Sharon Y. Kim…·Hosung Kim
This study uses MRI to analyze cyto/myeloarchitectural changes in preterm neonates' cortical gray matter and white matter, identifying spatiotemporal patterns and associations with developmental outcomes.
Mengting Liu, Piyush Maiti, Sophia I. Thomopoulos…·Neda Jahanshad
This paper uses a GAN-based style transfer approach to harmonize multi-site MRI images without requiring site labels or traveling subjects.
Kaori L. Ito, Hosung Kim, Sook‐Lei Liew
The paper compares automated lesion segmentation methods for chronic stroke T1-weighted MRI data, finding LINDA performs best overall while Gaussian Bayes has highest recall.
Sook‐Lei Liew, Julia M. Juliano, Nick W. Banks…·Alison Stroud
The paper introduces ATLAS, a dataset of 304 T1-weighted MRIs with manual lesion segmentations to improve lesion segmentation algorithm accuracy.