Anika Gupta

LBV-Seq enables de novo reconstruction of DNA and RNA viral genomes from low-input samples, achieving broad genome coverage and resolving strains and gene-level variation.

The paper profiles single-cell transcriptomes of Bacteroides fragilis infected with a phage, revealing combinatorial phase-variable expression of defense systems that enable super-resistant cells to avoid phage infection without mutations.

This paper maps natural products onto the plant tree of life using text mining and large language models, revealing lineage-specific distributions and demonstrating automation potential.