Author

Ahmed K. Alomari

Indiana University HospitalORCID 0000-0002-3776-5053Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:spatial transcriptomics· 1

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Jie ZhangiD· 1 shared Justin L. CouetiliD· 1 shared Kun HuangiD· 1 shared Travis S. JohnsoniD· 1 shared Ziyu LiuiD· 1 shared

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2023-2023 · peak 1/yr

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1 shared paperBioinformatics

Jie ZhangORCID

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Recent·Most cited

BioinformaticsbioRxivPreprintApr 21, 2023

Diagnostic Evidence Gauge of Spatial Transcriptomics (DEGAS): Using transfer learning to map clinical data to spatial transcriptomics in prostate cancer

Justin L. Couetil, Ziyu Liu, Ahmed K. Alomari…·Travis S. Johnson

The paper introduces DEGAS, a transfer learning framework that maps clinical data to spatial transcriptomics in prostate cancer, identifying transcriptional signatures of carcinogenesis in morphologically normal tissues.

10 citations

humanspatial transcriptomics

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