Author

Raphael Kuhn

ETH ZurichORCID 0000-0002-4068-2048Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 3 Research Focus:cell type annotation· 2 Approach:deep learning· 2 Research Focus:differential expression· 2 Assay:proteomics· 2 Assay:scRNA-seq· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Alexander YermanosiD· 3 shared Andreas AgrafiotisiD· 2 shared Danielle ShlesingeriD· 2 shared Sai T. ReddyiD· 2 shared Akashdip SinghiD· 1 shared Alberto Miranda BedateiD· 1 shared Alessandro Genovese· 1 shared Annette OxeniusiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersImmunology

Alexander YermanosORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

ImmunologyCell Reports MethodsPeer-reviewedApr 23, 2026

Dissecting serum polyclonal antibody escape to SARS-CoV-2 variants by deep mutational learning

Danielle Shlesinger, Viktor Sadílek, Mason Minot…·Sai T. Reddy

The paper uses deep mutational learning to analyze serum antibody escape to SARS-CoV-2 variants, finding individualized escape profiles and conserved binding signatures.

DOI 10.1016/j.crmeth.2026.101417

humanproteomics

𝕏 PostBluesky

ImmunologyThe Journal of ImmunologyPeer-reviewedJul 26, 2025

Clonally expanded IgG antibody-secreting cells preferentially target influenza nucleoprotein following homologous and heterologous infections

Andreas Agrafiotis, Raphael Kuhn, Camilla Panetti…·Alexander Yermanos

The paper characterizes clonal dynamics of antibody-secreting cells in bone marrow following influenza infection, finding that IgG ASCs preferentially target nucleoprotein regardless of infection type.

DOI 10.1093/jimmun/vkaf144

humanscRNA-seq

𝕏 PostBluesky

ImmunologyeLifePeer-reviewedMar 13, 2024

A novel bioinformatics pipeline for the identification of immune inhibitory receptors as potential therapeutic targets

Akashdip Singh, Alberto Miranda Bedate, Helen J. von Richthofen…·Linde Meyaard

The paper introduces a bioinformatics pipeline to identify known and putative immune inhibitory receptors as therapeutic targets using machine learning and transcriptomics data.

13 citations

humanbulk RNA-seq

𝕏 PostBluesky