Author

Dafni Giannari

University of TorontoORCID 0000-0002-4100-5401Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Approach:deep learning· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:metagenomics· 1

Frequent Co-Authors

Radhakrishnan MahadevaniD· 2 shared Cleo Han-Chen HoiD· 1 shared Jürgen ZanghelliniiD· 1 shared Mathias GotsmyiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 4 mutual co-author links

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2 shared papersBioengineering

Radhakrishnan MahadevanORCID

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2 papers

Recent·Most cited

BioengineeringIFAC-PapersOnLinePeer-reviewedJan 1, 2024

Optimizing Fed-Batch Processes with Dynamic Control Flux Balance Analysis

Mathias Gotsmy, Dafni Giannari, Radhakrishnan Mahadevan, Jürgen Zanghellini

This paper improves dynamic flux balance analysis for fed-batch processes by reducing KKT constraints and adapting the algorithm to predict optimal process length and feeding profiles.

5 citations

deep learningstatistical model

𝕏 PostBluesky

Systems BiologyPLoS Computational BiologyPeer-reviewedNov 1, 2021

A gap-filling algorithm for prediction of metabolic interactions in microbial communities

Dafni Giannari, Cleo Han-Chen Ho, Radhakrishnan Mahadevan

The paper introduces a community-level gap-filling algorithm to resolve metabolic gaps and predict interactions in microbial communities.

11 citations

E. colihuman

𝕏 PostBluesky