Author

Alexander L. Lin

Vanderbilt UniversityORCID 0000-0002-4444-4979Unclaimed ORCID profile · follow to get notified of new preprints

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Alexander Lin4 papers · Harvard University

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 1 Approach:contrastive learning· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:imaging· 1 Research Focus:spatial domain detection· 1 Approach:statistical model· 1

Frequent Co-Authors

Daniel MoyeriD· 1 shared Jean‐Philippe CartailleriD· 1 shared Ken S. LauiD· 1 shared Lana A CartailleriD· 1 shared Qi LiuiD· 1 shared Shunxing BaoiD· 1 shared Simon VandekariD· 1 shared Siyuan MaiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

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8 top collaborators · 16 mutual co-author links

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1 shared paperBioinformatics

Daniel MoyerORCID

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2 papers

Recent·Most cited

BioinformaticsIEEE International Symposium on Biomedical Imaging (ISBI)Peer-reviewedApr 8, 2026

BASSL-MI: Batch-Agnostic Self-Supervised Learning Uncovers Clinically Relevant Tumor Niches in Multiplexed Imaging

Alexander Lin, Shunxing Bao, Ken S. Lau…·Siyuan Ma

BASSL-MI uses self-supervised learning to identify clinically relevant tumor niches in multiplexed imaging without requiring cell segmentation.

DOI 10.1109/isbi61048.2026.11515373

𝕏 PostBluesky

BioinformaticsbioRxivPreprintSep 7, 2025

peakScout - a user-friendly and reversible peak-to-gene translator for genomic peak calling results

Alexander L. Lin, Lana A Cartailler, Jean‐Philippe Cartailler

peakScout translates genomic peak data to gene annotations and vice versa, providing a user-friendly tool for analyzing regulatory element-gene relationships.

1 citation

ChIP-seqstatistical model

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