Author

Henry L. Schreiber

Washington University in St. LouisORCID 0000-0002-4501-9886Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2 Bioinformatics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:cell-cell communication· 2 Organism:E. coli· 2 Assay:proteomics· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:deconvolution· 1

Frequent Co-Authors

Scott J. HultgreniD· 3 shared Abigail L. MansoniD· 2 shared Ashlee M. EarliD· 2 shared Colin J. WorbyiD· 2 shared Lucas R. van DijkiD· 2 shared Timothy J. StraubiD· 2 shared Alejo J. Nevado‐HolgadoiD· 1 shared Alexandra GroteiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 34 mutual co-author links

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3 shared papersMicrobiology

Scott J. HultgrenORCID

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4 papers

Recent·Most cited

MicrobiologybioRxivPreprintJun 16, 2026

Whole-proteome structure/function prediction in Uropathogenic E. coli reveals previously missed host-microbe and microbe-phage interaction pathways

Chunxiang Peng, Henry L. Schreiber, Chengxin Zhang…·Lydia Freddolino

The paper predicts the structure and function of all proteins in uropathogenic E. coli UTI89 using computational methods and identifies novel host-microbe and microbe-phage interaction pathways.

DOI 10.64898/2026.06.16.732597

E. coliproteomics

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MicrobiologyNature CommunicationsPeer-reviewedNov 2, 2024

Distinct Escherichia coli transcriptional profiles in the guts of recurrent UTI sufferers revealed by pangenome hybrid selection

M. G. Young, Timothy J. Straub, Colin J. Worby…·Ashlee M. Earl

This study identifies distinct E. coli transcriptional profiles in the guts of recurrent UTI sufferers using a novel pangenome hybrid selection method.

13 citations

E. colibulk RNA-seq

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BioinformaticsGenome biologyPeer-reviewedMar 7, 2022

StrainGE: A toolkit to track and characterize low-abundance strains in complex microbial communities

Lucas R. van Dijk, Bruce J. Walker, Timothy J. Straub…·Ashlee M. Earl

StrainGE identifies low-abundance microbial strains from metagenomic data with higher sensitivity and resolution than existing tools.

99 citationstop 2%

metagenomicsstatistical model

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NeuroscienceScientific ReportsPeer-reviewedOct 25, 2021

Indoxyl sulfate, a gut microbiome-derived uremic toxin, is associated with psychic anxiety and its functional magnetic resonance imaging-based neurologic signature

Christopher R. Brydges, Oliver Fiehn, Helen S. Mayberg…·Piero Rinaldo

The paper links indoxyl sulfate, a gut microbiome-derived metabolite, to anxiety symptoms and specific brain connectivity patterns in patients with depression.

99 citationstop 3%

humanproteomics

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