Author

Ibrahim-Elkhalil M. Adam

University of KhartoumORCID 0000-0002-4677-4533Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Organism:bacteria (other)· 1 Assay:DNA methylation· 1 Approach:simulation· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Ahmed Mudawi MusaiD· 1 shared Amna El-khateeb· 1 shared Asia M. Elrashid· 1 shared Eithar Abdulgyom· 1 shared Faris El-bakri· 1 shared Hiba Bayoumi· 1 shared Isam Abdokashif· 1 shared Musaab Oshi· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Ahmed Mudawi MusaORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintMar 8, 2021

PulseNet international: the missing link between PFGE and WGS

Ibrahim-Elkhalil M. Adam

The paper introduces a method to calculate PFGE resolution using Dice percentage and evaluates its impact on comparing PFGE profiles with in-silico digestion models derived from WGS.

DOI 10.1101/2021.03.08.434411

DNA methylationstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJul 5, 2020

Novel algorithms for PFGE bacterial typing: Number of co-migrated DNA fragments, linking PFGE to WGS results and computer simulations for evaluation of PulseNet international typing protocols

Ibrahim-Elkhalil M. Adam, Isam Abdokashif, Asia M. Elrashid…·Faris El-bakri

The paper introduces new algorithms to analyze PFGE data, links PFGE results to WGS through simulations, and evaluates the impact of co-migrating DNA fragments on typing accuracy.

1 citation

bacteria (other)whole-genome sequencing

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