Author

Miriam Ayla Goldman

Gladstone InstitutesORCID 0000-0002-4702-1365Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Chunyu ZhaoiD· 2 shared Katherine S. PollardiD· 2 shared Boris DimitroviD· 1 shared Stephen NayfachiD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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2 shared papersBioinformatics

Chunyu ZhaoORCID

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2 papers

Recent·Most cited

BioinformaticsPLoS Computational BiologyPeer-reviewedMay 27, 2025

Improved detection of microbiome-disease associations via population structure-aware generalized linear mixed effects models (microSLAM)

Miriam Ayla Goldman, Chunyu Zhao, Katherine S. Pollard

microSLAM identifies microbiome-disease associations by analyzing gene presence/absence across strains, revealing 49 species and 83 genes linked to IBD.

3 citations

humanmetagenomics

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedOct 28, 2022

MIDAS2: Metagenomic Intra-species Diversity Analysis System

Chunyu Zhao, Boris Dimitrov, Miriam Ayla Goldman…·Katherine S. Pollard

MIDAS2 improves metagenomic analysis by enhancing SNV and CNV detection with custom databases and paired-end reads, enabling efficient genotyping of large sample sets.

39 citations

metagenomicsstatistical model

𝕏 PostBluesky