Cécile Ané

The paper introduces the Gaussian Coalescent model to account for incomplete lineage sorting and gene flow in trait evolution, showing improved accuracy over standard models.

This paper introduces ECToBlob, an algorithm to estimate the tree of blobs from quartet concordance factors, providing a statistically consistent method for inferring phylogenetic networks.

The paper evaluates how substitution rate variation and hidden paralogy affect phylogenetic network inference methods, finding that rate variation causes false hybridization signals.

The paper investigates how ecological constraints and evolutionary trade-offs influence nitrogen fixation across different habitats by analyzing microbial genomes and environmental factors.

This study shows that inferring complex admixture graphs from f-statistics is inaccurate, especially for networks with small cycles and multiple reticulations, but the major tree can be reliably recovered.

SNaQ.jl improves scalability for phylogenetic network inference by enhancing computational efficiency without altering method accuracy.

KIMGENS estimates kinship in mixed haploid-diploid systems robust to population structure, outperforming existing methods in simulations and a honeybee dataset.