Author
Memorial University of NewfoundlandORCID 0000-0002-4789-8028Unclaimed ORCID profile · follow to get notified of new preprints
7 papers
Recent·Most cited
Xiang Chen, Teena Thakur, Anand Devaprasath D. Jeyasekharan…·Oscar Meruvia-Pastor
ColocZStats is a 3D Slicer extension that enables colocalization analysis on z-stacks with user-defined ROIs and thresholding.
Matthew Dyer, Roberto Tirado-Magallanes, Aida Ghayour Khiavi…·Touati Benoukraf
The paper introduces forkedTF, a tool to create FPWM and F-Logos for modeling TF dimer binding sites, and provides precomputed resources in MethMotif 2024.
Alexander K. Ebralidze, Simone Ummarino, Mahmoud Adel Bassal…·Daniel Geoffrey Tenen
The paper shows that cell cycle-specific long noncoding RNAs regulate the establishment and recycling of the acetylated histone H2A.Z epigenetic mark.
Yanjing V. Liu, Mahmoud Adel Bassal, Migara Kavishka Jayasinghe…·Daniel Geoffrey Tenen
CRISPR-DiR induces locus-specific demethylation and chromatin remodeling to reactivate the p16 gene.
Kwok Kin Lee, Yanzhou Zhang, Roberto Tirado-Magallanes…·Sudhakar Jha
This study shows TIP60 acetylates H2AZ, affecting DNA repair gene expression and doxorubicin sensitivity through RAD51 transcription.
Cheng Yong Tham, Roberto Tirado-Magallanes, Yufen Goh…·Touati Benoukraf
NanoVar accurately detects structural variants using low-depth Nanopore sequencing, achieving high F1 score in simulated data and uncovering normal alleles in patient samples.
Quy Xiao Xuan Lin, Khadija Rebbani, Sudhakar Jha, Touati Benoukraf
The paper investigates ZBTB33's role as a methylated DNA binding factor, revealing its association with primed heterochromatin through chromatin state analysis.