Author

Shiri Freilich

Agricultural Research OrganizationORCID 0000-0002-5173-9695Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Shiri Freilich1 paper

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Microbiology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 3 Organism:bacteria (other)· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Assay:metagenomics· 1 Organism:plant (other)· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Hanan EizenbergiD· 2 shared Jiandong JiangiD· 2 shared Shany OfaimiD· 2 shared Tamar LahaviD· 2 shared Adi Faigenboim‐DoroniD· 1 shared Alon Avraham GinattiD· 1 shared Daniella GatiD· 1 shared Diego Santos-GarcíaiD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersMicrobiology

Hanan EizenbergORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

MicrobiologybioRxivDec 11, 2023

A metabolic modeling-based framework for predicting trophic dependencies in native rhizobiomes of crop plants

Alon Avraham Ginatt, Maria Berihu, Einam Castel…·Shiri Freilich

This paper presents a metabolic modeling framework to predict trophic dependencies in rhizobiomes, identifying beneficial and non-beneficial microbial interactions in apple root environments.

5 citations

plant (other)metagenomics

𝕏 PostBluesky

BioinformaticsScientific ReportsPeer-reviewedAug 3, 2020

Genome-Scale reconstruction of Paenarthrobacter aurescens TC1 metabolic model towards the study of atrazine bioremediation

Shany Ofaim, Raphy Zarecki, Seema Porob…·Shiri Freilich

The paper constructs a genome-scale metabolic model for Paenarthrobacter aurescens TC1 to predict and optimize atrazine degradation under various media conditions.

36 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

Systems BiologyBMC GenomicsPeer-reviewedMay 25, 2018

Modeling trophic dependencies and exchanges among insects’ bacterial symbionts in a host-simulated environment

Itai Opatovsky, Diego Santos-García, Zhepu Ruan…·Shiri Freilich

The paper models metabolic interactions among bacterial symbionts in whiteflies to understand their dependencies and exchanges in a host-simulated environment.

45 citationstop 3%

statistical model

𝕏 PostBluesky