Author

Basak Koca Fındık

Centre National de la Recherche ScientifiqueORCID 0000-0002-5213-9712Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biophysics· 2 Biochemistry· 1

Signature Assays, Organisms & Methods

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Research Focus:drug response / drug discovery· 2 Approach:statistical model· 2 Approach:deep learning· 1 Approach:mechanistic / dynamical model· 1

Frequent Co-Authors

Antonio MonariiD· 3 shared Şaron ÇatakiD· 3 shared Ege Su UyariD· 1 shared Elise LognoniD· 1 shared Henri-Pierre LassalleiD· 1 shared Ilya YakavetsiD· 1 shared

Activity by Year

2023-2025 · peak 2/yr

Co-Author Collaboration Network

6 top collaborators · 10 mutual co-author links

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3 shared papersBiophysics

Antonio MonariORCID

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3 papers

Recent·Most cited

BiophysicsbioRxivPreprintMar 19, 2025

In Silico Study of Active Delivery of a Photodynamic Therapy Drug Targeting the Folate Receptor

Basak Koca Fındık, Elise Lognon, Şaron Çatak, Antonio Monari

The paper uses molecular dynamics simulations to study how a PDT drug conjugated with folic acid interacts with the folate receptor, showing stable complex formation and unchanged optical properties.

1 citation

statistical model

𝕏 PostBluesky

BiochemistryPhysical Chemistry Chemical PhysicsPeer-reviewedJan 1, 2025

Rational Molecular Design of Two-Photon Activated Temoporfin: A Computational Study for Advanced Photodynamic Therapy

Basak Koca Fındık, Ege Su Uyar, Antonio Monari, Şaron Çatak

This study designs and computationally analyzes TPA-temoporfin conjugates to enhance PDT efficiency in deep tissues by improving solubility and NIR absorption.

4 citations

deep learningstatistical model

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BiophysicsbioRxivPreprintOct 16, 2023

Efficient Drug Delivering of a Photodynamic Therapy Agent into Cellular Membranes Rationalized by Molecular Dynamics

Basak Koca-Findik, Ilya Yakavets, Henri-Pierre Lassalle…·Antonio MONARI

This study uses molecular dynamics simulations to analyze the behavior of a PDT drug complex in lipid bilayers, showing its internalization and dissociation, supporting its efficacy.

DOI 10.1101/2023.10.16.562486

mechanistic / dynamical modeldrug response / drug discovery

𝕏 PostBluesky