Author

Maryam Rahmati Ishka

Boyce Thompson InstituteORCID 0000-0002-5447-643XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:plant (other)· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Assay:proteomics· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1

Frequent Co-Authors

Magdalena JulkowskaiD· 4 shared Eric J. CraftiD· 3 shared Miguel A. PiñerosiD· 3 shared Andrew D. L. NelsoniD· 2 shared Hayley SussmaniD· 2 shared Li’ang YuiD· 2 shared Mark A. TesteriD· 2 shared Aaron Garza· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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4 shared papersPlant Biology

Magdalena JulkowskaORCID

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4 papers

Recent·Most cited

Plant BiologybioRxivPreprintJul 17, 2026

Salt stress shifts wild tomato root systems toward transport efficiency along a gravitropism-constrained Pareto front

Aaron Garza, Kathryn Altman, Alleen Koenig…·Arjun Chandrasekhar

The paper models how salt stress alters root system architecture in wild tomatoes by incorporating lateral-root curvature and identifies a heritable genetic locus associated with transport efficiency.

DOI 10.64898/2026.07.16.738932

plant (other)bulk RNA-seq

𝕏 PostBluesky

Plant BiologyPlant DirectPeer-reviewedMay 1, 2026

Exogenous Hormone Treatments Reveal Species-Specific Regulation of Individual Components of Root Architecture and Salt Ion Accumulation in Cultivated and Wild Tomatoes

Maryam Rahmati Ishka, Eric J. Craft, Miguel A. Piñeros, Magdalena Julkowska

The paper investigates how exogenous hormone treatments affect root architecture and salt ion accumulation in tomato species under stress, revealing species-specific hormonal responses.

1 citation

plant (other)proteomics

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Plant BiologyeLifePeer-reviewedJul 25, 2024

Natural variation in salt-induced changes in root:shoot ratio reveals SR3G as a negative regulator of root suberization and salt resilience in Arabidopsis

Maryam Rahmati Ishka, Hayley Sussman, Yunfei Hu…·Magdalena Julkowska

14 citations

Arabidopsisproteomics

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Plant BiologybioRxivPreprintJun 20, 2024

Ethylene and ROS Signaling Are Key Regulators of Lateral Root Development under Salt Stress in Tomato

Maryam Rahmati Ishka, Jiantao Zhao, Hayley Sussman…·Magdalena Julkowska

This study identifies genes regulating lateral root development in tomato under salt stress, revealing ethylene and ROS signaling as key factors.

2 citations

plant (other)bulk RNA-seq

𝕏 PostBluesky