Author

Oleg Agafonov

DNV (Norway)ORCID 0000-0002-5563-4014Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:whole-genome sequencing· 2 Approach:benchmark study· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Abdulrahman A. AzabiD· 1 shared Eivind J. HovigiD· 1 shared Kaja O. Kjølås· 1 shared Sen ZhaoiD· 1 shared Sharmini Alagaratnam· 1 shared Sigrun Vik· 1 shared Tomasz StokowyiD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 9 mutual co-author links

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1 shared paperBioinformatics

Abdulrahman A. AzabORCID

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2 papers

Recent·Most cited

Genetic & Genomic MedicinemedRxivPreprintMar 15, 2021

Reporting results of diagnostic NGS-based testing - user-centered redesign of the clinical report.

Oleg Agafonov, Sigrun Vik, Kaja O. Kjølås, Sharmini Alagaratnam

The paper redesigns clinical NGS reports using user-centered design to improve clarity and usability for clinicians.

DOI 10.1101/2021.03.15.20197236

whole-exome sequencingwhole-genome sequencing

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BioinformaticsScientific ReportsPeer-reviewedNov 19, 2020

Accuracy and efficiency of germline variant calling pipelines for human genome data

Sen Zhao, Oleg Agafonov, Abdulrahman A. Azab…·Eivind J. Hovig

This study compares three germline variant calling pipelines for WGS data, finding DRAGEN and DeepVariant offer better accuracy with no significant difference in F1-score, while DRAGEN provides higher efficiency.

118 citationstop 3%

humanwhole-genome sequencing

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