Author

Sünje Johanna Pamp

Novo Nordisk FoundationORCID 0000-0002-6236-1763Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1

Frequent Co-Authors

Agus SalimiD· 1 shared Anna Cäcilia MascheiD· 1 shared Frank M. AarestrupiD· 1 shared Guillaume MériciD· 1 shared Katrine Kielsen· 1 shared Klaus Gottlob Müller· 1 shared Malene Skovsted Cilieborg· 1 shared Michael InouyeiD· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Agus SalimORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsScientific ReportsPeer-reviewedDec 23, 2022

Assessing and removing the effect of unwanted technical variations in microbiome data

Muhamad Fachrul, Guillaume Méric, Michael Inouye…·Agus Salim

This study identifies major technical variations in microbiome data and evaluates a batch correction tool to minimize their impact on downstream analyses.

18 citations

metagenomicsstatistical model

𝕏 PostBluesky

MicrobiologybioRxivPreprintMar 28, 2019

Specific Gut Microbiome Members are Associated with Distinct Immune Markers in Allogeneic Hematopoietic Stem Cell Transplantation

Anna Cäcilia Masche, Katrine Kielsen, Malene Skovsted Cilieborg…·Sünje Johanna Pamp

The paper identifies associations between gut microbiome taxa and immune markers in HSCT patients, linking specific microbial profiles to clinical outcomes like aGvHD and mortality.

DOI 10.1101/590893

humanmetagenomics

𝕏 PostBluesky