Ivana Cvijović

This study shows that B cells in human tonsils migrate locally during affinity maturation at a consistent rate, contributing to diversity while balancing selection.

The paper benchmarks large language models for cell-type and gene set annotation using AnnDictionary, finding high accuracy in cell-type annotation and strong functional gene set recovery.

This paper introduces a method to capture non-coding RNAs in single-cell RNA-seq, revealing new insights into gene regulation in immune cells, infected hepatocytes, and brain development.

The paper analyzes single B cell data from human tissues to show lineage co-localization and uniform differentiation rates, providing a model for antibody memory formation.

This paper introduces grmlin, a reference-free method to detect germline immunoglobulin alleles from B cell receptor sequencing data, achieving better specificity than existing methods.

Nearly 500,000 cells from 24 human tissues, many from one donor, characterize over 400 cell types and enable within-donor study of T-cell clones, B-cell mutation rates and splicing.