Author

Clément Nicolle

Centre National de la Recherche ScientifiqueORCID 0000-0002-6533-2546Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 2 Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Assay:proteomics· 2 Organism:bacteria (other)· 1 Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1 Approach:matrix factorization· 1

Frequent Co-Authors

Bernard DumasiD· 3 shared Thomas ReyiD· 3 shared Aurélien Amiel· 2 shared Damien GayrardiD· 2 shared Guillaume MartiiD· 2 shared Alba NoëliD· 1 shared Aurélie Le RuiD· 1 shared Céline VandecasteeleiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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3 shared papersPlant Biology

Bernard DumasORCID

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3 papers

Recent·Most cited

Plant BiologybioRxivPreprintAug 28, 2026

A Galbonolide producing Streptomyces reconfigures the plant root microbiota by activating salicylate-dependent defence metabolism

Clément Nicolle, Mohamed Zouaoui, Rémi Pendaries…·Thomas Rey

This study shows Streptomyces AgN23 activates plant immune responses via galbonolides, altering root microbiota composition and secondary metabolism.

DOI 10.64898/2026.08.27.747519

Arabidopsisproteomics

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MicrobiologyThe ISME JournalPeer-reviewedJan 1, 2024

Root-associated Streptomyces produce galbonolides to modulate plant immunity and promote rhizosphere colonisation

Clément Nicolle, Damien Gayrard, Alba Noël…·Thomas Rey

This study identifies galbonolides as metabolites produced by Streptomyces AgN23 that modulate plant immunity and promote rhizosphere colonization by triggering defense mechanisms and inhibiting competitors.

24 citationstop 4%

Arabidopsisproteomics

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GenomicsbioRxivPreprintOct 25, 2021

Genomic adaptation in the CAZyome and specialised metabolism of the plant-associated Streptomyces violaceusniger clade

Damien Gayrard, Marine Veyssière, Clément Nicolle…·Thomas Rey

This paper sequenced and analyzed the genome of Streptomyces sp. AgN23, revealing its ability to produce auxin, degrade plant cell walls, and synthesize antimicrobials, with these features conserved in the S. violaceusniger clade.

DOI 10.1101/2021.10.25.465742

bacteria (other)whole-genome sequencing

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