Author

Sophie Dhorne‐Pollet

AgroParisTechORCID 0000-0002-6722-0003Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:long-read sequencing· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:ATAC-seq· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Éric BarreyiD· 2 shared Adeline Goubil· 1 shared Alexandre ChenaliD· 1 shared Andréa RauiD· 1 shared Bernard DelmasiD· 1 shared Bruno R. da CostaiD· 1 shared Cédric CabauiD· 1 shared Charlotte Deloizy· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersMicrobiology

Éric BarreyORCID

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3 papers

Recent·Most cited

MicrobiologyVeterinary ResearchPeer-reviewedMar 22, 2024

Genome sequences of equine influenza A subtype H3N8 viruses by long read sequencing and functional characterization of the PB1-F2 virulence factor of A/equine/Paris/1/2018

Lena Kleij, Elise Bruder, Dorothée Raoux‐Barbot…·Sophie Dhorne‐Pollet

This study uses long-read sequencing to characterize equine influenza A H3N8 viruses, identifying antigenic drift and a virulence-enhancing PB1-F2 protein variant.

5 citations

zebrafishlong-read sequencing

𝕏 PostBluesky

GenomicsBMC GenomicsPeer-reviewedNov 11, 2020

A new method for long-read sequencing of animal mitochondrial genomes: application to the identification of equine mitochondrial DNA variants

Sophie Dhorne‐Pollet, Éric Barrey, Nicolas Pollet

The paper introduces a method for long-read sequencing of mitochondrial genomes using nanopore technology, achieving high enrichment of mtDNA and identifying variants with high precision.

26 citations

long-read sequencingexperimental assay

𝕏 PostBluesky

GenomicsbioRxivPreprintMay 16, 2019

Transcriptome and chromatin structure annotation of liver, CD4+ and CD8+ T cells from four livestock species.

Sylvain Foissac, Sarah Djebali, Kylie Munyard…·Elisabetta Giuffra

The paper annotates transcriptomes and chromatin structures in liver and T cells from four livestock species using RNA-seq, ATAC-seq, and Hi-C, revealing conserved regulatory elements and genome organization patterns.

11 citations

bulk RNA-seqATAC-seq

𝕏 PostBluesky