Author

Sojung Lee

University of Hong KongORCID 0000-0002-7090-6372Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:long-read sequencing· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Jason W.H. WongiD· 2 shared Jayne A. BarbouriD· 2 shared Yuanhua HuangiD· 2 shared Ashish GoyaliD· 1 shared Giyoun Han· 1 shared Hao‐Cheng YangiD· 1 shared Hyunsoo KimiD· 1 shared Jaemyun LyuiD· 1 shared

Activity by Year

2023-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersCancer Biology

Jason W.H. WongORCID

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3 papers

Recent·Most cited

Cancer BiologyJournal of Biological ChemistryPeer-reviewedApr 30, 2025

A tumor necrosis factor-α responsive cryptic promoter drives overexpression of the human endogenous retrovirus ERVK-7

Sojung Lee, Yin Yee Ho, Suyu Hao…·Jason W.H. Wong

The paper identifies a TNF-α responsive cryptic promoter driving ERVK-7 overexpression in LUAD, revealing cell-type and inflammatory signal-specific regulation.

4 citations

humanbulk RNA-seq

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MicrobiologybioRxivPreprintDec 3, 2023

Identification and Analysis of SARS-CoV-2 Mutation and Subtype using 2x tiled Primer Set with Oxford Nanopore Technologies Sequencing for Enhanced Variant Detection and Surveillance in Seoul, Korea

Giyoun Han, Sojung Lee, YaeEun Kwon…·Minlee Kim

The paper uses long-read sequencing with a 2x tiled primer set to identify SARS-CoV-2 mutations and subtypes in Seoul, Korea, showing improved variant detection and genotype-patient characteristic correlation.

DOI 10.1101/2023.12.03.569831

viruslong-read sequencing

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GenomicsbioRxivPreprintMar 21, 2023

Integrating long-read RNA sequencing improves locus-specific quantification of transposable element expression

Sojung Lee, Jayne A. Barbour, Yee Man Tam…·Jason W.H. Wong

LocusMasterTE improves TE expression quantification by integrating long-read and short-read RNA-seq data using an EM algorithm.

2 citations

humanlong-read sequencing

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