Matthew S. Fullmer

This paper presents an eco-evolutionary model showing that Black Queen dynamics can lead to either distributed or centralized common good production, depending on the interaction range among ecotypes.

The paper tests the pitcher hypothesis for the evolution of Utricularia bladder traps using statistical model comparison of phylogenetic data.

This study shows that combining 3Di characters with sequence data improves phylogenetic resolution in protein superfamilies, but 3Di's effectiveness is reduced in alpha-helical proteins.

This paper uses tertiary-interaction characters to improve structural phylogenetics beyond the twilight zone, achieving accurate results with fast computation.

The paper introduces a new ANI metric combining genomic content and identity to improve phylogenetic inference and taxonomic classification using whole-genome data.

The paper investigates the distribution of restriction-modification system genes and orphan methyltransferases in Halobacteria, finding conserved methyltransferases and patchy RM system distribution due to horizontal gene transfer and loss.