Author
Netherlands eScience CenterORCID 0000-0002-7635-9533Unclaimed ORCID profile · follow to get notified of new preprints
Mutual co-authors in cluster
6 papers
Recent·Most cited
Luca Santuari, Sonja Georgievska, Arnold Kuzniar…·Jeroen de Ridder
sv-channels improves SV detection precision using deep learning, outperforming GRIDSS while maintaining Manta's recall.
Nicolas Renaud, Cunliang Geng, Sonja Georgievska…·Li C. Xue
DeepRank uses 3D CNNs to mine protein-protein interfaces, achieving competitive or better performance in classification and docking model ranking.
Florian Huber, Sven van der Burg, Justin J. J. van der Hooft, Lars Ridder
MS2DeepScore uses a Siamese neural network to predict structural similarity from mass fragmentation spectra, outperforming classical methods and enabling chemically meaningful spectral embeddings.
Florian Huber, Lars Ridder, Stefan Verhoeven…·Justin J. J. van der Hooft
Spec2Vec improves spectral similarity scoring by learning fragmental relationships, showing better correlation with structural similarity than cosine-based scores in metabolomics analyses.
Simon Rogers, Cher Wei Ong, Joe Wandy…·Justin J. J. van der Hooft
This paper introduces methods to improve metabolite annotation using substructure discovery and machine learning, along with a database for shared motifs.
Vincent T. van Hees, Eric G.A.L Van Diessen, Michel R.T. Sinke…·Willem M. Otte
This study uses low-cost consumer-grade EEG and machine learning to classify epilepsy in rural settings, achieving moderate cross-country performance.