Nicolas Henry

This study uses eDNA metabarcoding to show that bottom trawling affects prokaryotic and Animalia benthic communities, with long-term impacts on Animalia diversity and unexpected effects on community structure.

This study examines seasonal pigment diversity in Synechococcus at two temperate ocean sites, revealing distinct patterns linked to environmental factors and ecological niches.

The paper characterizes the eukaryotic diversity in coral reef environments, revealing high diversity and identifying environmental drivers shaping these communities.

The paper investigates the diversity and distribution of Apicomplexa across marine environments using metabarcoding data, revealing previously unknown diversity and biogeographic patterns.

OligoN-design designs taxon-specific oligonucleotides from target and non-target sequences, outperforming existing tools by handling large datasets efficiently.

The paper introduces the JEDI marker as a universal biodiversity measure, demonstrating its applicability across ecological scales and providing an automated bioinformatic workflow for standardized analysis.

The paper examines seasonal changes in protist communities in the Gulf of Aqaba, showing shifts between parasitic and autotrophic dominance linked to nutrient and mixing conditions.

This study analyzes diatom diversity and abundance in the global ocean using Tara Oceans data, identifying key environmental drivers and community patterns.

The paper analyzes global ocean data to show that physical and biological patchiness are decoupled, using variance slope to quantify spatial patterns.

The paper identifies freshwater and terrestrial environments as diversity hotspots for short-branch Microsporidia to guide future sampling efforts.

The paper quantifies plankton community structure globally, revealing inverted biomass pyramids dominated by gelatinous organisms and predicting future shifts in oceanic carbon cycles.

This study investigates the relationship between protist metabarcoding OTUs and metagenome-assembled genomes by analyzing their abundance correlations across environmental samples.

EukRibo provides a curated 18S rDNA database for accurate taxonomic annotation of environmental metabarcoding data, focusing on eukaryotic diversity.

This study evaluates eDNA metabarcoding protocols for deep-sea biodiversity, finding that DNA is more reliable than RNA and larger sediment samples improve accuracy.