Author

Junfeng Liu

Simcere Pharmaceutical (China)ORCID 0000-0002-7789-8918Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Research Focus:benchmarking· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Hao GuoiD· 2 shared Yong ReniD· 2 shared Chun Xia Song· 1 shared Ju GuiD· 1 shared Runran Ma· 1 shared Zule Guo· 1 shared

Activity by Year

2023-2023 · peak 2/yr

Co-Author Collaboration Network

6 top collaborators · 12 mutual co-author links

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2 shared papersBioinformatics

Hao GuoORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintAug 29, 2023

ReDis: efficient metagenomic profiling via assigning ambiguous reads

Chun Xia Song, Zule Guo, Ju Gu…·Junfeng Liu

ReDis improves metagenomic profiling accuracy by efficiently assigning ambiguous reads using a statistical model combined with Kraken2 and Minimap2.

DOI 10.1101/2023.08.29.555244

metagenomicsstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintFeb 27, 2023

Centrifuge+: improving metagenomic analysis upon Centrifuge

Junfeng Liu, Runran Ma, Yong Ren, Hao Guo

Centrifuge+ improves metagenomic abundance estimation by addressing ambiguous reads through unique mapping rate, outperforming Centrifuge on simulated data.

1 citation

metagenomicsstatistical model

𝕏 PostBluesky