Author

Shin Matsubara

Hokkaido UniversityORCID 0000-0002-7794-534XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:statistical model· 2 Organism:C. elegans· 1 Research Focus:cell type annotation· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

Akira ShiraishiiD· 2 shared Honoo SatakeiD· 2 shared Azumi Wada· 1 shared Hiroshi KajiharaiD· 1 shared Issei S. ShimadaiD· 1 shared Naohiro HasegawaiD· 1 shared Noa ShenkariD· 1 shared Takehiro G. KusakabeiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersEvolutionary Biology

Akira ShiraishiORCID

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2 papers

Recent·Most cited

Evolutionary BiologybioRxivPreprintJul 1, 2025

Gamete release in Ciona robusta: roles of gonadotropin-releasing hormone and the photoreception system

Tomohiro Osugi, Shin Matsubara, Akira Shiraishi…·Honoo Satake

This study identifies distinct roles of GnRH1 and GnRH2 in gamete release and ovarian function in Ciona robusta, revealing the OPO as a photoreceptive organ involved in reproductive regulation.

DOI 10.1101/2025.07.01.661410

C. elegansbulk RNA-seq

𝕏 PostBluesky

Evolutionary BiologybioRxivPreprintDec 27, 2023

From solitary to colonial with zooid miniaturization: ancestral-state reconstruction based on NGS data of stolidobranch ascidians

Naohiro Hasegawa, Shin Matsubara, Akira Shiraishi…·Hiroshi Kajihara

The paper uses NGS data to reconstruct ancestral states in stolidobranch ascidians, finding that coloniality leads to zooid miniaturization and that coloniality evolved independently three times.

DOI 10.1101/2023.12.27.573391

bulk RNA-seqstatistical model

𝕏 PostBluesky