Author

Shili Duan

University Health NetworkORCID 0000-0002-7855-2425Unclaimed ORCID profile · follow to get notified of new preprints

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Shili Duan1 paper

Biology Disciplines

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Cell Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:protein structure prediction· 1 Assay:proteomics· 1

Frequent Co-Authors

Cheryl H. ArrowsmithiD· 2 shared Anni PaniD· 1 shared Brian RaughtiD· 1 shared Christopher E. PearsoniD· 1 shared Clinton P. TurneriD· 1 shared Costanza Ferrari BardileiD· 1 shared Dalia Baršytė-LovejoyiD· 1 shared David Y. Nie· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersMolecular Biology

Cheryl H. ArrowsmithORCID

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2 papers

Recent·Most cited

Molecular BiologyNature CommunicationsPeer-reviewedAug 29, 2025

Characterization of PROTAC specificity and endogenous protein interactomes using ProtacID

Suman Shrestha, Matthew E. R. Maitland, Jing Li…·Brian Raught

This paper introduces ProtacID, a BioID-based method to identify PROTAC-proximal proteins, validates degradation targets, and identifies non-productive interactions in human cells.

4 citations

humanproteomics

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Cell BiologyScience AdvancesPeer-reviewedJul 19, 2024

Huntingtin is an RNA-binding protein and participates in NEAT1-mediated paraspeckles

Manisha Yadav, Rachel J. Harding, Tiantian Li…·Cheryl H. Arrowsmith

This study identifies huntingtin as an RNA-binding protein that interacts with G-rich RNA sequences, including those in the NEAT1 paraspeckle lncRNA.

11 citations

humanbulk RNA-seq

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