BioinformaticsGenome biologyPeer-reviewed
SUPPA2 provides fast, accurate, and uncertainty-aware differential splicing analysis across multiple conditions
Juan L. Trincado, Juan Carlos Entizne, Gerald Hysenaj…·Eduardo Eyras
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Universitat Pompeu FabraORCID 0000-0002-7989-9084Unclaimed ORCID profile · follow to get notified of new preprints
3 papers
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Juan L. Trincado, Juan Carlos Entizne, Gerald Hysenaj…·Eduardo Eyras
Endre Sebestyén, Babita Singh, Belén Miñana…·Eduardo Eyras
The paper analyzes genome and transcriptome alterations in multiple tumors to identify novel cancer-relevant splicing networks involving RNA-binding proteins and alternative splicing changes.
Juan Gonzalez-Vallinas, Amadís Pagès, Babita Singh, Eduardo Eyras
The paper introduces a semi-supervised method to identify intragenic enhancers differentially active in human cell lines and predicts thousands of such enhancers with functional properties.