Integrating genetic regulation and single-cell expression with GWAS prioritizes causal genes and cell types for glaucoma
Andrew R. Hamel, Wenjun Yan, John M. Rouhana…·Ayellet V. Segrè
Author
Broad InstituteORCID 0000-0002-8599-0271Unclaimed ORCID profile · follow to get notified of new preprints
7 papers
Recent·Most cited
Andrew R. Hamel, Wenjun Yan, John M. Rouhana…·Ayellet V. Segrè
John M. Rouhana, Jiali Wang, Gökçen Eraslan…·Ayellet V. Segrè
ECLIPSER identifies causal cell types and genes for complex traits by integrating GWAS loci with single-cell RNA-seq data through e/sQTL mapping and enrichment analysis.
Stephane E. Castel, François Aguet, Pejman Mohammadi…·Valentin Wucher
The paper presents a large ASE resource from GTEx v8 with 431 million SNP-level and 153 million haplotype-level measurements, and extends phASER to estimate cis regulatory variant effect sizes.
Kathryn Demanelis, Farzana Jasmine, Lin Chen…·Xiaoquan Wen
The paper examines telomere length variation across 6,391 tissue samples from 952 individuals, showing tissue-specific differences, positive correlations between tissues, and associations with age and ancestry.
Lihua Jiang, Meng Wang, Shin Lin…·Leslie H. Sobin
The paper quantifies protein levels across 32 human tissues and compares them to transcriptome data, revealing insights into post-transcriptional regulation and disease mechanisms.
Puya Gharahkhani, Eric Jorgenson, Pirro G. Hysi…·Janey L. Wiggs
François Aguet, Alvaro Barbeira, Rodrigo Bonazzola…·Tuuli Lappalainen
GTEx v8 maps expression and splicing QTLs in 49 tissues from 838 donors: cis-eQTLs cover 94.7% of protein-coding genes, and cross-tissue QTL sharing mirrors cell-type composition.