Author

Sarah De Beuckeleer

University of AntwerpORCID 0000-0002-8964-4480Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Approach:deep learning· 2 Assay:imaging· 2 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Tim Van De LooverboschiD· 2 shared Winnok Harald De VosiD· 2 shared Frederik De SmetiD· 1 shared Jan SijbersiD· 1 shared Johanna Van Den DaeleiD· 1 shared Peter PonsaertsiD· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

6 top collaborators · 11 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Tim Van De LooverboschORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJul 18, 2024

PAC-MAP: Proximity Adjusted Centroid Mapping for Accurate Detection of Nuclei in Dense 3D Cell Systems

Tim Van De Looverbosch, Sarah De Beuckeleer, Frederik De Smet…·Winnok Harald De Vos

PAC-MAP improves nucleus detection in dense 3D cell systems by predicting centroid positions and proximity, achieving high recall and F1 scores in spheroids and organoids.

DOI 10.1101/2024.07.18.602066

imagingdeep learning

𝕏 PostBluesky

Cell BiologyeLifePeer-reviewedMar 13, 2024

Unbiased identification of cell identity in dense mixed neural cultures

Sarah De Beuckeleer, Tim Van De Looverbosch, Johanna Van Den Daele…·Winnok Harald De Vos

The paper develops an imaging assay with CNNs to accurately identify cell types in dense mixed neural cultures, outperforming time-based classification and enabling quality control of iPSC-derived models.

4 citations

humanimaging

𝕏 PostBluesky