Author

Marc Griesemer

Lawrence Livermore National LaboratoryORCID 0000-0002-9705-3736Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Organism:bacteria (other)· 1 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Ali NavidiD· 2 shared Carol E. Zhou· 1 shared Jeffrey A. KimbreliD· 1 shared Patrik D’haeseleeriD· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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2 shared papersSystems Biology

Ali NavidORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintMay 20, 2021

MOFA: Multi-Objective Flux Analysis for the COBRA Toolbox

Marc Griesemer, Ali Navid

The paper introduces MOFA, an add-on tool for the COBRA Toolbox that enables multi-objective flux analysis of metabolic trade-offs using genome-scale models.

4 citations

statistical modelbenchmarking

𝕏 PostBluesky

BioinformaticsBMC GenomicsPeer-reviewedDec 1, 2018

Combining multiple functional annotation tools increases coverage of metabolic annotation

Marc Griesemer, Jeffrey A. Kimbrel, Carol E. Zhou…·Patrik D’haeseleer

The paper reannotates 27 bacterial genomes using multiple functional annotation tools, significantly increasing the coverage of metabolic annotations.

67 citations

bacteria (other)DNA methylation

𝕏 PostBluesky