Author

Gavin E. Duggan

Google (United States)ORCID 0000-0002-9869-4447Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:plant (other)· 1 Approach:transformer / foundation model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

James C. SchnableiD· 1 shared Michael C. TrossiD· 1 shared Nikee ShresthaiD· 1 shared

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2024-2024 · peak 1/yr

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3 top collaborators · 3 mutual co-author links

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1 shared paperPlant Biology

James C. SchnableORCID

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1 paper

Recent·Most cited

Plant BiologybioRxivPreprintJun 4, 2024

Models trained to predict differential expression across plant organs identify distal and proximal regulatory regions

Michael C. Tross, Gavin E. Duggan, Nikee Shrestha, James C. Schnable

The paper uses a transformer model to predict gene expression patterns across plant organs and identifies regulatory regions in maize and sorghum genomes.

2 citations

plant (other)DNA methylation

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