Mitra Ansariola

This study compares the transcriptomes of salt-tolerant Pokkali and susceptible IR29 rice under salinity stress to identify differentially expressed genes and genetic variants associated with salt tolerance.

The paper identifies cis-regulatory determinants of tissue-specific gene expression in Arabidopsis thaliana by analyzing TSS-seq, OC-seq, and RNA-seq data, finding that TSS-proximal TF binding sites are more important than distal chromatin regions.

IndeCut evaluates network motif discovery algorithms to determine their performance and guide tool selection for any network of interest.