Author

Amy Goldman

Pacific Northwest National LaboratoryORCID 0000-0003-0490-6451Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

A. E. Goldman6 papers

Biology Disciplines

Click to filter author papers

Ecology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:metagenomics· 3 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1

Frequent Co-Authors

James StegeniD· 3 shared Mikayla A. BortoniD· 2 shared Vanessa A. Garayburu‐CarusoiD· 2 shared Adam Scott WardiD· 1 shared Alexander J. ProbstiD· 1 shared Allison Myers‐PiggiD· 1 shared André SoaresiD· 1 shared Avni MalhotraiD· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersEcology

James StegenORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

EcologybioRxivPreprintNov 6, 2025

Harnessing artificial intelligence to automate environmental predictions

Avni Malhotra, Brieanne Forbes, Stefan F. Gary…·James Stegen

The paper uses AI to iteratively improve environmental predictions by combining field sampling with machine learning, significantly enhancing sediment oxygen consumption forecasts across the U.S.

1 citation

metagenomicsmachine learning (classical)

𝕏 PostBluesky

MicrobiologybioRxivPreprintFeb 16, 2025

A uniform stress response of stream microbiomes in the hyporheic zone across North America

Tom Lennard Stach, Jörn Starke, Feriel Bouderka…·Alexander J. Probst

The paper analyzes hyporheic zone microbiomes across North America to show conserved stress responses and distinct metabolic activity in sediments versus surface water.

DOI 10.1101/2025.02.16.638492

metagenomicsexperimental assay

𝕏 PostBluesky

EcologybioRxivPreprintJan 10, 2024

Meta-metabolome ecology reveals that geochemistry and microbial functional potential are linked to organic matter development across seven rivers

Robert Danczak, A. E. Goldman, Mikayla Borton…·James Stegen

The paper links geochemistry and microbial functional potential to organic matter development across seven rivers using DOM characterization, geochemical analyses, and shotgun metagenomics.

1 citation

metagenomicsstatistical model

𝕏 PostBluesky