Ludovic Duvaux

The paper presents haplotype-resolved chromosome-level genome assemblies for four European white oak species, providing resources for comparative genomics and pangenome studies.

MSpangenome simulates population pangenomes from coalescent demographic models to benchmark graph construction tools.

This paper constructs cross-taxon pangenomes for tree species, identifies structural variants, and evaluates their functional relevance using the Armeniaca taxonomic section.

The paper compares imputation methods for targeted DNA methylation sequencing data in poplar and oak, finding NIPALS, MissForest, and LOESS as the most accurate.

This study examines epigenetic variation in black poplar trees, showing how genetic and epigenetic differences contribute to adaptation and evolution across different geographic populations.