assayM: a web application to monitor mutations in COVID-19 diagnostic assays.
assayM monitors mutations in SARS-CoV-2 diagnostic assays by analyzing global genome datasets against WHO and custom primer sequences.
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King Abdullah University of Science and TechnologyORCID 0000-0003-1734-1007Unclaimed ORCID profile · follow to get notified of new preprints
3 papers
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assayM monitors mutations in SARS-CoV-2 diagnostic assays by analyzing global genome datasets against WHO and custom primer sequences.
Qingtian Guan, Mukhtar Sadykov, Sara Mfarrej…·Arnab Pain
The paper defines a genetic barcoding scheme using 10-nucleotide classifiers to classify SARS-CoV-2 clades from genomic data, achieving high accuracy in identifying circulating viral populations.
Abdallah M. Abdallah, E.M. Weerdenburg, Qingtian Guan…·A. Pain
This study shows that WhiB6 regulates ESX-1 substrate secretion in mycobacteria, independent of structural components, through transcriptional control and protein interactions.