Author

AT Vivek

National Institute of Plant Genome ResearchORCID 0000-0003-2046-4841Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1

Frequent Co-Authors

Shailesh KumariD· 2 shared Aashish RanjaniD· 1 shared Aditi DwivediiD· 1 shared Ajeet B. SinghiD· 1 shared Anurag DawareiD· 1 shared Mahesh Kumar Panda· 1 shared Rajarshi SanyaliD· 1 shared Ruchi RaniiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 29 mutual co-author links

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2 shared papersPlant Biology

Shailesh KumarORCID

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2 papers

Recent·Most cited

Plant BiologybioRxivPreprintAug 7, 2025

Variations in regulatory sequences rewire gene networks that differentiate wild and cultivated rice for leaf development and photosynthesis

Vikram Jathar, Mahesh Kumar Panda, AT Vivek…·Aashish Ranjan

This study identifies regulatory sequence variations that rewired gene networks, leading to differences in leaf development and photosynthesis between wild and cultivated rice.

DOI 10.1101/2025.08.07.669153

plant (other)bulk RNA-seq

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BioinformaticsPLoS ONEPeer-reviewedApr 14, 2021

AlnC: An extensive database of long non-coding RNAs in Angiosperms

Ajeet B. Singh, Thiruvettai Vivek, Shailesh Kumar

AlnC is a database containing 10.8 million annotated lncRNA transcripts from 809 tissues of 682 flowering plants, providing tools for exploration and analysis.

29 citations

plant (other)long-read sequencing

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