Yu-Ping Hong

This study evaluates Oxford Nanopore sequencing for AMR detection in Salmonella, comparing it to phenotypic testing and finding high concordance but notable discrepancies in resistance classification.

This paper demonstrates that adaptive sampling-based sequencing enables efficient genome reconstruction of intracellular symbionts from host-dominated samples, achieving high completeness and revealing structural divergence from reference genomes.

This study evaluates Nanopore sequencing's effectiveness for genotyping Listeria monocytogenes and Salmonella enterica serovar Enteritidis, finding it comparable to Illumina in accuracy for outbreak strain discrimination.