Author

Jonathan Hira

University of Inland NorwayORCID 0000-0003-2649-2296Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:differential expression· 2 Research Focus:variant calling· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:deconvolution· 1 Assay:DNA methylation· 1 Assay:fluorescence / live-cell microscopy· 1

Frequent Co-Authors

Jawad AliiD· 2 shared Rafi AhmadiD· 2 shared Anel Mahmutovic· 1 shared Anurag Basavaraj BellankimathiD· 1 shared Arif Ahmed SekhiD· 1 shared Bhupender SinghiD· 1 shared Christian Stephan LentziD· 1 shared Clement AjayiiD· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersMicrobiology

Jawad AliORCID

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3 papers

Recent·Most cited

MicrobiologyFrontiers in MicrobiologyPeer-reviewedDec 2, 2025

Low-Cost In-House Re-formulated Brain Heart Infusion Medium for Effective Planktonic Growth and Early Detection of Bloodstream Bacterial Pathogens

Jonathan Hira, Nasib Bin Mahbub, Jawad Ali, Rafi Ahmad

The paper develops a low-cost in-house culture medium for faster and more accessible detection of bloodstream bacterial pathogens compared to commercial systems.

1 citation

bacteria (other)metagenomics

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MicrobiologybioRxivPreprintJul 14, 2025

Development and optimization of the host DNA depletion in blood cultures using a saponin and SAN nucleases-based method

Jawad Ali, Anurag Basavaraj Bellankimath, Jonathan Hira…·Rafi Ahmad

This paper develops and optimizes a method using saponin and SAN nucleases to deplete host DNA from blood cultures, improving bacterial DNA extraction for sepsis diagnosis.

4 citations

DNA methylationwhole-genome sequencing

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MicrobiologyCommunications BiologyPeer-reviewedOct 1, 2024

High-throughput single-cell phenotypic profiling and backtracing exposes and predicts clinically relevant subpopulations in isogenic Staphylococcus aureus communities.

Jonathan Hira, Bhupender Singh, Tirthankar Halder…·Christian Stephan Lentz

The paper introduces CPPT, a method to profile and trace phenotypic subpopulations in isogenic bacterial communities, revealing clinically relevant biomarkers for antibiotic resistance.

11 citations

fluorescence / live-cell microscopyexperimental assay

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