Author

Lan Zhao

Stanford MedicineORCID 0000-0003-2681-7695Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:metagenomics· 1

Frequent Co-Authors

Hanlee P. JiiD· 2 shared HoJoon LeeiD· 2 shared Stephanie GreeriD· 2 shared Susan M. GrimesiD· 2 shared Adam M. Andruska· 1 shared Alison Figueroa AlmedaiD· 1 shared Carlos Jose SuareziD· 1 shared Christine M. Cunningham· 1 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersGenomics

Hanlee P. JiORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

MicrobiologybioRxivMay 19, 2023

Rat microbial biogeography and age-dependent lactic acid bacteria in healthy lungs

Lan Zhao, Christine M. Cunningham, Adam M. Andruska…·Mark R. Nicolls

This study defines the microbial biogeography of healthy Fischer 344 rats across their lifespan and identifies age-dependent changes in lactic acid bacteria in the lungs.

DOI 10.1038/s41684-023-01322-x

ratmetagenomics

𝕏 PostBluesky

GenomicsNAR CancerPeer-reviewedOct 4, 2021

Characterization of the consensus mucosal microbiome of colorectal cancer

Lan Zhao, Susan M. Grimes, Stephanie Greer…·Hanlee P. Ji

This study identifies a consensus microbiome for colorectal cancer by analyzing 924 tumors across eight RNA-Seq datasets, finding 114 microbial species consistently associated with tumors.

21 citations

humanbulk RNA-seq

𝕏 PostBluesky

GenomicsGenome MedicinePeer-reviewedSep 6, 2021

Profiling diverse sequence tandem repeats in colorectal cancer reveals co-occurrence of microsatellite and chromosomal instability involving Chromosome 8

Gi Won Shin, Stephanie Greer, Erik S. Hopmans…·Hanlee P. Ji

The paper develops a high-coverage sequencing approach to profile microsatellite and chromosomal instability in colorectal cancer, revealing co-occurrence of MSI and CIN features.

15 citations

humanwhole-genome sequencing

𝕏 PostBluesky