Bram Nap

This study shows that PPI-associated microbiome changes cause systemic metabolic and transcriptional responses, affecting metabolism and inflammation in multiple tissues.

The paper introduces the MicroMap, a curated metabolic network visualization resource for microbiome metabolism, integrating with existing tools and providing educational and comparative capabilities.

APOLLO provides 247,092 genome-scale metabolic models of human microbes, enabling strain-level taxonomic prediction and disease-associated metabolite analysis.