Author

Yuandong Li

Chinese Academy of SciencesORCID 0000-0003-3034-3154Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:metabolism & bioenergetics· 1 Assay:metabolomics· 1 Assay:metagenomics· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Jian XuiD· 2 shared Yanhai GongiD· 2 shared Bo MaiD· 1 shared Gongchao JingiD· 1 shared Hao Yuan· 1 shared Jia Zhang· 1 shared Jia ZhangiD· 1 shared Jie CheniD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersBioinformatics

Jian XuORCID

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2 papers

Recent·Most cited

BioinformaticsMicrobiomePeer-reviewedFeb 10, 2026

RamEx: An R package for high-throughput microbial ramanome analyses with accurate quality assessment

Yanmei Zhang, Gongchao Jing, Rongze Chen…·Luyang Sun

RamEx is an R package for high-throughput microbial ramanome analysis with quality assessment and classification, achieving high accuracy in anomaly detection and phenotyping.

6 citationstop 2%

bacteria (other)metagenomics

𝕏 PostBluesky

MicrobiologyThe InnovationPeer-reviewedJan 18, 2025

Phylogeny-metabolism dual-directed single-cell genomics for dissecting and mining ecosystem function

Xiaoyan Jing, Yanhai Gong, Zhidian Diao…·Jian Xu

This paper introduces FISH-scRACS-Seq, a method to identify and sequence single cells with specific metabolic functions, revealing a new cyclohexane-degrading enzyme system in marine bacteria.

10 citations

scRNA-seqmetabolomics

𝕏 PostBluesky