Author

Daniel Ryan

University of WürzburgORCID 0000-0003-4261-2702Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:Arabidopsis· 1 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Alexander J. WestermanniD· 3 shared Gianluca PrezzaiD· 2 shared Lars BarquistiD· 2 shared Sarah ReichardtiD· 2 shared Aalap MogreiD· 1 shared Adam M. DeutschbaueriD· 1 shared Ali ShaibahiD· 1 shared Ann-Sophie RüttigeriD· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersMicrobiology

Alexander J. WestermannORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

MicrobiologyNature CommunicationsPeer-reviewedJan 2, 2025

The RNA-binding protein RbpB is a central regulator of polysaccharide utilization in gut Bacteroides

Ann-Sophie Rüttiger, Daniel Ryan, Luisella Spiga…·Alexander J. Westermann

This study identifies RbpB as a key RNA-binding protein regulating polysaccharide utilization in gut Bacteroides through post-transcriptional control of PULs.

26 citationstop 1%

mouseexperimental assay

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MicrobiologyNucleic Acids ResearchPeer-reviewedJul 19, 2024

Global analysis of the RNA-RNA interactome in Acinetobacter baumannii AB5075 uncovers a small regulatory RNA repressing the virulence-related outer membrane protein CarO

Fergal J. Hamrock, Daniel Ryan, Ali Shaibah…·Carsten Kröger

The paper identifies a small regulatory RNA, Aar, that represses virulence-related genes in A. baumannii through antisense base-pairing, revealing sRNA-mediated gene regulation in this pathogen.

15 citations

Arabidopsisexperimental assay

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Molecular BiologyNature MicrobiologyPeer-reviewedMar 25, 2024

An integrated transcriptomics-functional genomics approach reveals a small RNA that modulates Bacteroides thetaiotaomicron sensitivity to tetracyclines

Daniel Ryan, Elise Bornet, Gianluca Prezza…·Alexander J. Westermann

The paper identifies a small RNA, MasB, that increases Bacteroides thetaiotaomicron tolerance to tetracyclines by modulating gene expression under antibiotic stress.

32 citationstop 2%

bacteria (other)bulk RNA-seq

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