Author

Qiong Chen

First Affiliated Hospital Zhejiang UniversityORCID 0009-0004-4369-5620Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Research Focus:gene regulatory network inference· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Chao JiangiD· 3 shared Liuyiqi JiangiD· 2 shared Peng CheniD· 2 shared Peng GaoiD· 2 shared Xiaotao SheniD· 2 shared Zinuo HuangiD· 2 shared Cunqi YeiD· 1 shared Dongmei Tang· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersBioinformatics

Chao JiangORCID

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3 papers

Recent·Most cited

BioinformaticsBioinformaticsPeer-reviewedMay 16, 2026

MetaNet: a scalable and integrated tool for reproducible omics network analysis

Peng Chen, Liuyiqi Jiang, Zinuo Huang…·Chao Jiang

MetaNet is an R package for scalable multi-omics network analysis, offering faster computation and better memory efficiency than existing tools, with applications in microbial and exposome-transcriptome studies.

8 citationstop 1%

multiomestatistical model

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BioinformaticsBriefings in BioinformaticsPeer-reviewedMar 1, 2024

Generalized Reporter Score-based Enrichment Analysis for Omics Data

Peng Chen, Qiong Chen, Shangjin Tan…·Chao Jiang

The paper introduces GRSA, a generalized reporter score-based method for multi-group and longitudinal omics data, showing increased sensitivity and applied it to microbiome, transcriptome, and metabolome data.

76 citationstop 1%

metagenomicsbulk RNA-seq

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MicrobiologybioRxivPreprintSep 26, 2023

Progressive community, biogeochemical and evolutionary remodeling of the soil microbiome underpins long-term desert ecosystem restoration

Qiong Chen, Mengyi Yuan, Liuyiqi Jiang…·Chao Jiang

This study examines the long-term microbial changes in desert soil during ecological restoration, finding shifts in community structure, functional diversity, and biogeochemical cycles over 17 years.

2 citations

metagenomicsexperimental assay

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