Benchmarking long-read variant sensitivity across ONT and PacBio platforms using known clinically reported variants in a cohort of critically ill newborns
Colby T. Marvin, Joseph M. Devaney, Kati J. Buckingham…·Jessica X. Chong
Author
University of WashingtonORCID 0009-0004-6894-8399Unclaimed ORCID profile · follow to get notified of new preprints
Mutual co-authors in cluster
6 papers
Recent·Most cited
Colby T. Marvin, Joseph M. Devaney, Kati J. Buckingham…·Jessica X. Chong
Ben Heavner, Marsha M. Wheeler, Jesse D. Bengtsson…·Jessica X. Chong
The paper introduces a data model and dataset for rare disease research, enabling interoperable multi-omic data integration across clinical sites.
Tara Lynn Wenger, Abbey A. Scott, Lukas Kruidenier…·Michael J. Bamshad
SeqFirst-neo uses a genotype-driven workflow with broad exclusion criteria to increase access to rapid whole genome sequencing in critically ill newborns, significantly improving the rate and equity of precise genetic diagnoses.
Jessica X. Chong, Matthew Carter Childers, Colby T. Marvin…·Michael J. Bamshad
The paper identifies heterozygous missense variants in ACTC1 as the cause of distal arthrogryposis with congenital heart defects in five families.
Alina Izabela Esterhuizen, Nicki Tiffin, Gillian Tracy Riordan…·Gemma L. Carvill
The paper identifies genetic variants in South African children with developmental and epileptic encephalopathies and proposes a 'Think-Genetics' strategy for early genetic diagnosis in resource-limited settings.
Jessica X. Chong, Jared Coffin Talbot, Emily M. Teets…·Michael J. Bamshad
The paper identifies mutations in MYLPF causing segmental amyoplasia with distal arthrogryposis, showing both dominant and recessive inheritance patterns and linking MYLPF impairment to muscle degeneration.