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Cell BiologybioRxiv

Single-cell transcriptomics of dynamic cell behaviors

V. Vinarsky, A. Haber, S. J. Kwok, S.-H. Yun, D. T. Montoro

Abstract

Despite advances in spatial transcriptomics, the molecular profiling of dynamic behaviors of cells in their native environment remains a major challenge. We present a method, termed behavioral transcriptomics, that allows us to couple physiological behaviors of single cells in an intact tissue to deep molecular profiling of individual cells. This method enabled us to establish a novel molecular signature for a striking migratory cellular behavior following tissue injury.

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