Author

A. Criscuolo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 7 Biochemistry· 3 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 7 Approach:statistical model· 6 Organism:bacteria (other)· 4 Approach:experimental assay· 4 Research Focus:cell type annotation· 3 Organism:human· 3 Research Focus:phylogenetics / evolution· 3 Research Focus:differential expression· 2

Frequent Co-Authors

S. Brisse· 7 shared J. Guglielmini· 3 shared M. Hennart· 3 shared C. Rodrigues· 2 shared J. Toubiana· 2 shared K. A. Jolley· 2 shared M. Blueher· 2 shared M. C. J. Maiden· 2 shared

Activity by Year

2017-2024 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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7 shared papersMicrobiology

S. Brisse

Mutual co-authors in cluster

Author profile →

11 papers

Recent·Most cited

Life Identification Numbers: A bacterial strain nomenclature approach

F. Palma, M. Hennart, K. A. Jolley, C. Crestani, K. L. Wyres, S. Bridel, C. A. Yeats, B. Brancotte, B. Raffestin, S. David, M. M. C. Lam, R. Izdebski, V. Passet, C. Rodrigues, M. Rethoret-Pasty, , S. Brisse

The paper proposes the Life Identification Number (LIN) system as a stable, multilevel strain taxonomy for bacterial pathogens based on core genome MLST to improve epidemiological tracking and nomenclature consistency.

bioRxiv · Mar 11, 2024Microbiology

Viral origin of eukaryotic type IIA DNA topoisomerases

J. Guglielmini, M. Gaia, V. Da Cunha, A. Criscuolo, M. Krupovic, P. Forterre

This study investigates the origin of eukaryotic type IIA DNA topoisomerases by analyzing phylogenetic relationships between viral and cellular homologs, finding that they likely originated from Nucleocytoviricota viruses.

bioRxiv · Apr 12, 2022Evolutionary Biology

Characterisation and sequence mapping of large RNA and mRNA therapeutics using mass spectrometry

C. Vanhinsbergh, A. Criscuolo, J. Sutton, K. Murphy, A. J. Williamson, K. Cook, M. J. Dickman

This study develops an automated workflow for rapid characterization and sequence mapping of large RNA and mRNA therapeutics using mass spectrometry.

bioRxiv · Feb 14, 2022Biochemistry

Epilipidomics platform for holistic profiling of oxidized complex lipids in blood plasma of obese individuals

A. Criscuolo, P. Nepachalovich, D. F. Garcia-del Rio, M. Lange, Z. Ni, M. Blueher, M. Fedorova

The paper develops an epilipidomics platform to profile oxidized complex lipids in blood plasma of obese individuals and identifies metabolic disorder-related lipid modification signatures.

bioRxiv · Dec 23, 2021 · PreprintBiochemistry

A dual barcoding approach to bacterial strain nomenclature: Genomic taxonomy of Klebsiella pneumoniae strains

M. Hennart, J. Guglielmini, M. C. J. Maiden, K. A. Jolley, A. Criscuolo, S. Brisse

The paper introduces a dual barcoding system for bacterial strain classification using Klebsiella pneumoniae genomes, defining sublineages with genetic dissimilarity thresholds and providing a publicly accessible taxonomy platform.

bioRxiv · Jul 26, 2021Microbiology

Genomic epidemiology and strain taxonomy of Corynebacterium diphtheriae

J. Guglielmini, M. Hennart, E. Badell, J. Toubiana, A. Criscuolo, S. Brisse

This study develops a cgMLST scheme for C. diphtheriae to track outbreaks and reveals cryptic transmission chains and sublineages.

bioRxiv · Jul 18, 2021Microbiology

AdipoAtlas: A Reference Lipidome for Human White Adipose Tissue

M. Lange, G. Angelidou, Z. Ni, A. Criscuolo, J. Schiller, M. Blueher, M. Fedorova

The paper presents AdipoAtlas, a reference lipidome of human white adipose tissue, identifying lipid remodeling in lean and obese individuals.

bioRxiv · Jan 20, 2021Biochemistry

The speciation and hybridization history of the genus Salmonella

A. Criscuolo, S. Issenhuth-Jeanjean, X. Didelot, K. Thorell, J. Hale, J. Parkhill, N. Thomson, F.-X. Weill, D. Falush, S. Brisse

This study investigates the speciation and hybridization history of Salmonella, identifying eleven phylogroups and revealing complex hybridization events that challenge traditional speciation models.

bioRxiv · Apr 5, 2019Microbiology

Carriage of a single strain of non-toxigenic Corynebacterium diphtheriae biovar Belfanti (Corynebacterium belfantii) in four patients with cystic fibrosis

D. Pivot, A. Fanton, E. Badell-Ocando, M. Benouachkou, K. Astruc, F. Huet, L. Amoureux, C. Neuwirth, A. Criscuolo, S. Aho, J. Toubiana, S. Brisse

This study identifies a non-toxigenic C. belfantii strain persistently colonizing four CF patients and transmitted within a CF care center over six years.

bioRxiv · Jan 17, 2019Microbiology

Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov.

C. Rodrigues, V. Passet, A. Rakotondrasoa, T. A. Diallo, A. Criscuolo, S. Brisse

The paper describes three new bacterial taxa within the Klebsiella genus based on genomic and biochemical analyses.

bioRxiv · Jan 9, 2019Microbiology

Outbreak of invasive wound mucormycosis in a burn unit due to multiple strains of Mucor circinelloides f. circinelloides resolved by whole genome sequencing

D. Garcia-Hermoso, A. Criscuolo, S. c. Lee, M. Legrand, M. Chaouat, B. Denis, M. Lafaurie, M. Rouveau, C. Soler, J.-V. Schaal, M. Mimoun, A. Mebazaa, J. Heitman, D. Francoise, S. Brisse, , A. Alanio

This study used whole genome sequencing to investigate an outbreak of invasive wound mucormycosis in a burn unit, revealing multiple strains from an environmental reservoir rather than direct patient-to-patient transmission.

bioRxiv · Dec 12, 2017Microbiology