Author

V. Passet

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 9 Ecology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Organism:bacteria (other)· 5 Assay:whole-genome sequencing· 5 Research Focus:cell type annotation· 3 Research Focus:host-pathogen & immune response· 3 Approach:statistical model· 3 Organism:C. elegans· 2 Assay:DNA methylation· 2

Frequent Co-Authors

S. Brisse· 10 shared C. Rodrigues· 7 shared M. Hennart· 4 shared J. Toubiana· 3 shared A. Carmi-Leroy· 2 shared A. Criscuolo· 2 shared C. Crestani· 2 shared E. Badell-Ocando· 2 shared

Activity by Year

2018-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 34 mutual co-author links

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10 shared papersMicrobiology

S. Brisse

Mutual co-authors in cluster

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10 papers

Recent·Most cited

Life Identification Numbers: A bacterial strain nomenclature approach

F. Palma, M. Hennart, K. A. Jolley, C. Crestani, K. L. Wyres, S. Bridel, C. A. Yeats, B. Brancotte, B. Raffestin, S. David, M. M. C. Lam, R. Izdebski, V. Passet, C. Rodrigues, M. Rethoret-Pasty, , S. Brisse

The paper proposes the Life Identification Number (LIN) system as a stable, multilevel strain taxonomy for bacterial pathogens based on core genome MLST to improve epidemiological tracking and nomenclature consistency.

bioRxiv · Mar 11, 2024Microbiology

A global Corynebacterium diphtheriae genomic framework sheds light on current diphtheria reemergence

M. Hennart, C. Crestani, S. Bridel, N. Armatys, S. Bremont, A. Carmi-Leroy, A. Landier, V. Passet, L. Fonteneau, S. Vaux, J. Toubiana, E. Badell-Ocando, S. Brisse

The paper develops a bioinformatics pipeline to analyze C. diphtheriae genomes, revealing virulence and resistance heterogeneities and emerging threats.

bioRxiv · Feb 20, 2023Microbiology

Genomic epidemiology of Corynebacterium diphtheriae in New Caledonia

E. Tessier, M. Hennart, E. Badell-Ocando, V. Passet, J. Toubiana, A. Biron, A.-C. Gourinat, A. Merlet, J. Colot, S. Brisse

This study analyzes C. diphtheriae isolates in New Caledonia, identifying tox-positive strains linked to travel and local transmission, while most isolates are non-toxigenic and antibiotic-susceptible.

bioRxiv · Oct 23, 2022 · PreprintMicrobiology

Phages against non-capsulated Klebsiella pneumoniae: broader host range, slower resistance

M. Lourenco, L. Osbelt, V. Passet, F. Gravey, T. Strowig, C. Rodrigues, S. Brisse

This study isolates and compares phages targeting capsule-deficient Klebsiella pneumoniae strains, finding they have broader host ranges and slower resistance emergence than phages targeting capsule-expressing strains.

bioRxiv · Aug 4, 2022 · PreprintMicrobiology

Leakiness at the human-animal interface in Southeast Asia and implications for the spread of antibiotic resistance

M. L. Nadimpalli, M. Stegger, R. Viau, V. Yith, A. de Lauzanne, N. Sem, L. Borand, B.-t. Huynh, S. Brisse, V. Passet, S. Overballe-Petersen, M. Aziz, M. Gouali, J. Jacobs, T. Phe, , L. B. Price

The paper identifies antibiotic resistance elements shared between humans and animals in Cambodia, highlighting the need to address human-animal interface leaks to combat antimicrobial resistance.

bioRxiv · Mar 15, 2021Ecology

The ZKIR Assay, a novel Real-Time PCR Method for the Detection of Klebsiella pneumoniae and Closely Related Species in Environmental Samples

E. BARBIER, C. Rodrigues, G. Depret, V. Passet, L. Gal, P. Piveteau, S. Brisse

The paper develops the ZKIR assay, a real-time PCR method for detecting Klebsiella pneumoniae in environmental samples, showing it is more sensitive than culture-based methods and reveals genetic differences between environmental and clinical isolates.

Applied and Environmental Microbiology · Mar 18, 2020Peer-reviewedMicrobiology

Description of Corynebacterium rouxii sp. nov., a novel member of the diphtheriae species complex

E. Badell, M. Hennart, C. Rodrigues, V. Passet, M. Dazas, L. Panunzi, V. Bouchez, A. Carmi-Leroy, J. Toubiana, S. Brisse

The paper describes a new Corynebacterium species, C. rouxii, based on genomic and phenotypic analysis of six isolates previously classified as C. diphtheriae biovar Belfanti.

bioRxiv · Nov 26, 2019 · PreprintMicrobiology

Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov.

C. Merla, C. Rodrigues, V. Passet, M. Corbella, H. A. Thorpe, T. V. S. Kallonen, Z. Zong, P. Marone, C. Bandi, D. Sassera, J. Corander, E. J. Feil, S. Brisse

This paper describes two new Klebsiella species, K. spallanzanii and K. pasteurii, based on genomic and biochemical analyses of phylogroups Ko3 and Ko4, with type strains isolated from various sources.

bioRxiv · Jul 16, 2019Microbiology

Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov.

C. Rodrigues, V. Passet, A. Rakotondrasoa, T. A. Diallo, A. Criscuolo, S. Brisse

The paper describes three new bacterial taxa within the Klebsiella genus based on genomic and biochemical analyses.

bioRxiv · Jan 9, 2019Microbiology

Identification of Klebsiella pneumoniae complex members using MALDI-TOF mass spectrometry

C. Rodrigues, V. Passet, S. Brisse

This study identifies MALDI-TOF mass spectrometry biomarkers for distinguishing Klebsiella pneumoniae complex phylogroups with high sensitivity and specificity.

bioRxiv · Jun 19, 2018Microbiology