Author

A. Ravikumar

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 1 Cancer Biology· 1 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Approach:biophysical modeling· 1 Research Focus:clustering· 1 Assay:cryo-EM· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

J. S. Fraser· 2 shared S. Sharma· 2 shared A. Raju· 1 shared B. Riley· 1 shared C. B. Macdonald· 1 shared D. A. Keedy· 1 shared D. W. Hogan· 1 shared E. A. Collisson· 1 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersCancer Biology

J. S. Fraser

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Author profile →

4 papers

Recent·Most cited

Mapping kinase domain resistance mechanisms for the MET receptor tyrosine kinase via deep mutational scanning

G. O. Estevam, E. M. Linossi, J. Rao, C. B. Macdonald, A. Ravikumar, K. M. Chrispens, J. A. Capra, W. Coyote-Maestas, H. Pimentel, E. A. Collisson, N. Jura, J. S. Fraser

The paper uses deep mutational scanning to analyze MET kinase domain mutations and their resistance to 11 inhibitors, identifying resistance and sensitizing mutations and improving prediction with a protein language model.

bioRxiv · Jul 16, 2024Cancer Biology

Skin microbiota variation in Indian families

R. Potbhare, A. RaviKumar, E. Munukka, R. Ashma, L. Lahti

This study examines skin microbiota variation among Indian families, finding that diet and geography influence microbiota composition, while family membership shows significant association.

bioRxiv · Dec 9, 2023Microbiology

Uncovering Protein Ensembles: Automated Multiconformer Model Building for X-ray Crystallography and Cryo-EM

S. A. Wankowicz, A. Ravikumar, S. Sharma, B. Riley, A. Raju, D. W. Hogan, J. Flowers, H. van den Bedem, D. A. Keedy, J. S. Fraser

This paper introduces enhanced qFit software for building multiconformer models from structural biology data, improving accuracy and usability.

bioRxiv · Jun 28, 2023Biophysics

Cold storage reveals distinct metabolic perturbations in processing and non-processing cultivars of potato

S. S. Datir, S. Yousuf, S. Sharma, M. Kochle, A. Ravikumar, J. Chugh

The paper uses metabolomic profiling and bioinformatics to identify metabolite biomarkers and genes involved in cold-induced sweetening in potato cultivars.

bioRxiv · Jun 6, 2019Plant Biology