Author

A. S. Ortiz-Baez

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:host-pathogen & immune response· 4 Assay:metagenomics· 4 Approach:statistical model· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1

Frequent Co-Authors

E. C. Holmes· 5 shared J. L. Geoghegan· 3 shared F. Di Giallonardo· 2 shared J. E. Mahar· 2 shared J. E. Williamson· 2 shared M. Shi· 2 shared A. A. Hoffmann· 1 shared A. J. Carthey· 1 shared

Activity by Year

2020-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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5 shared papersMicrobiology

E. C. Holmes

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Author profile →

5 papers

Recent·Most cited

MicrobiologybioRxivOct 20, 2022

Gammaretroviruses, novel viruses and pathogenic bacteria in Australian bats with neurological signs, pneumonia and skin lesions

K. Van Brussel, J. E. Mahar, J. Hall…·K. Rose

This study identifies pathogens in Australian bats with neurological signs, pneumonia, and skin lesions using metatranscriptomic sequencing and traditional diagnostics.

DOI 10.1016/j.virol.2023.07.011

bacteria (other)metagenomics

𝕏 PostBluesky

MicrobiologybioRxivMay 9, 2021

RNA virome diversity and Wolbachia infection in individual Drosophila simulans flies

A. S. Ortiz-Baez, M. Shi, A. A. Hoffmann, E. C. Holmes

This study investigates the impact of Wolbachia wAu strain on RNA virome composition in Drosophila simulans and identifies novel viruses in the species.

DOI 10.1099/jgv.0.001639

Drosophilametagenomics

𝕏 PostBluesky

MicrobiologybioRxivOct 6, 2020

Meta-transcriptomic identification of divergent Amnoonviridae in fish

O. M. H. Turnbull, A. S. Ortiz-Baez, J.-S. Eden…·J. L. Geoghegan

The paper identifies two new Amnoonviridae viruses in fish and finds additional TiLV transcripts, suggesting a broad host range for the family.

DOI 10.3390/v12111254

bulk RNA-seqexperimental assay

𝕏 PostBluesky

MicrobiologybioRxivPreprintJun 15, 2020

Red fox viromes across an urban-rural gradient

S. J. Campbell, W. Ashley, M. Gil-Fernandez…·J. L. Geoghegan

This study compares viromes of urban and rural red foxes, finding differences in viral abundance and diversity, and identifies novel viruses with potential zoonotic relevance.

DOI 10.1101/2020.06.15.153858

metagenomicsexperimental assay

𝕏 PostBluesky

MicrobiologybioRxivPreprintMay 6, 2020

Virome composition in marine fish revealed by meta-transcriptomics

J. L. Geoghegan, F. Di Giallonardo, M. Wille…·E. C. Holmes

The paper uses meta-transcriptomics to analyze virome composition in marine fish, identifying new viruses and factors shaping virome diversity.

DOI 10.1101/2020.05.06.081505

multiple speciesmetagenomics

𝕏 PostBluesky