Author

A. Violette

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:mouse· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Organism:chicken / avian· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

J. Sonnenburg· 2 shared K. C. Huang· 2 shared R. Culver· 2 shared A. L. Shiver· 1 shared A. M. Deutschbauer· 1 shared B. D. Knapp· 1 shared B. DeFelice· 1 shared B. H. Good· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersMicrobiology

J. Sonnenburg

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Improved mouse models of the small intestine microbiota using region-specific sampling from humans

R. Culver, S. P. Spencer, A. Violette, E. Lemus Silva, T. Takeuchi, C. Nafarzadegan, S. Higginbottom, D. Shalon, J. Sonnenburg, K. C. Huang

The paper develops improved mouse models of the small intestine microbiota using region-specific human intestinal sampling and in vitro culturing, showing increased diversity and reproducibility in colonization.

bioRxiv · Apr 24, 2024 · PreprintMicrobiology

A mutant fitness compendium in Bifidobacteria reveals molecular determinants of colonization and host-microbe interactions

A. L. Shiver, J. Sun, R. Culver, A. Violette, C. Wynter, M. Nieckarz, S. P. Mattiello, P. K. Sekhon, L. Friess, H. K. Carlson, D. Wong, S. K. Higginbottom, M. Weglarz, W. Wang, B. D. Knapp, , K. C. Huang

The paper creates a mutant fitness compendium for Bifidobacterium breve to identify molecular factors affecting colonization and host-microbe interactions.

bioRxiv · Aug 29, 2023 · PreprintMicrobiology